Attenuated fowlpox vaccine
A wild isolate attenuated by serial passage in embryonated eggs, formulated with an adjuvant and tested in chickens.
3peer-reviewed papers
2MSc degrees
1vaccine taken to trial
C1English & Turkish
Two sides of one question
At the bench
I have propagated and attenuated a wild fowlpox virus isolate into a candidate vaccine and taken it through a chicken trial with antibody analysis — alongside molecular biology, microbiology and in vitro work.
On the computer
I build and audit models for immunopeptidomics and protein biology, with a focus on reproducibility — preregistration, decision logs and keeping withdrawn results on the record.
Selected work
Sequence-only CNN benchmark
Can a 1D CNN tell real HLA class-I peptides from decoys, and how does it compare with published predictors on identical rows?
Bacterial HLA ligand audit
Error-controlled reanalysis of tumour immunopeptidomes, asking how many bacterial peptide claims survive proper controls.
SH3 mechanism atlas
Does a cancer mutation break an SH3 domain's fold or change its binding? Predicting one, and quantifying why the other can't yet be predicted.